Is there a keyboard shortcut to close pinned tabs in Safari?
I tried cmdW like for normal tabs but it didn't work.
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As a workaround, I'd set up a keyboard shortcut in Safari for both Pin Tab and Unpin Tab to the same shortcut, e.g., ⌥⌘P and then you can toggle the pinned status of the Tab with the same keyboard shortcut.
This way when a Tab is pinned and you want to close it, using the keyboard, you'd first press, e.g., ⌥⌘P then: ⌘W
System Preferences > Keyboard > Shortcuts > App Shortcuts