I've noticed that when I try to open a file in any newly added applications, the application opens, but not the file. I've noticed this problem with multiple Wine versions, and also web-based games.
I haven't had this problem before.
I've tried re-installing macOS Sierra, deleting ~/Library/Prefrences/com.apple.LaunchServices/ and ~/Library/Prefrences/com.apple.LaunchServices.plist and then relaunching Finder, but still have this problem.
Mid-2012 MacBook Pro, macOS Sierra, 10.12.6