Every time I try to run IGV, I'm greeted with can't find Java Runtime error dialog. I have Java installed on the system as running
/Library/Java/JavaVirtualMachines/jdk1.8.0_05.jdk/Contents/Home. I also have the
JAVA_HOME variable set to the above value (though the value is not included in my PATH).
java command is also accessible through command line so I don't see any reason why the application can't access it. Running
java -version returns
I believe I also have the legacy Apple Java 6 installed although the preference pane for that is not available (maybe something wrong here?) and I don't know how to verify its installation.
I'm on 10.13 High Sierra.
/usr/libexec/java_home -V shows that both Java 6 and 8 are installed:
Matching Java Virtual Machines (3): 1.8.0_05, x86_64: "Java SE 8" /Library/Java/JavaVirtualMachines/jdk1.8.0_05.jdk/Contents/Home 1.6.0_65-b14-468, x86_64: "Java SE 6" /Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home 1.6.0_65-b14-468, i386: "Java SE 6" /Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home /Library/Java/JavaVirtualMachines/jdk1.8.0_05.jdk/Contents/Home
Any help is appreciated.