Every time I restart my computer, it tries to "add a new helper tool". For instance I have to reinstall shell commands in Atom on every restart, and it prompts with the "An update is ready to install." But I see this same issue with other programs too.
Atom installs /usr/local/bin/atom
-- but then when I restart it's gone.
I get the same thing from MAMP that it "wants to make changes".
And Slack gives me the same thing as Atom on every restart:
An update is ready to install. Slack is trying to add a new helper tool.
Enter an administrator's name and password to allow this.
Add Helper
Let me know what other information I can give.