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I don't see any native functionality to export highlighted notes made from within iBooks

Is there a third-party tool that will allow this?

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3 Answers 3

3rd party app Digested - does exactly what you need: "Quickly import bookmarks and notes from iBooks on iPhone, iPod, iPad, export to PDF and Evernote..."

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yes there is, if you have a mac.

Get iExplorer here http://www.macroplant.com/iexplorer/

plug in your iOS device and use iExplorer to look in the books file and drag the following files to your desktop. iBooks.plist and iBooksData2.plist

and this app https://github.com/lgoss007/BookmarkExtractor

put the files in the appropriate spot and you can get your highlights

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sweet, i will check this out. thanks for the suggestion –  qntmfred Feb 3 '12 at 19:12
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Sorry, but (at least currently) there's no way to do this.

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